1,364 search results for “computational biologie” in the Public website
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Microbial enzymes for degradation and upcycling of natural and non-natural polymers
Learning from nature and utilizing microbial biodiversity to identify and characterize enzymes for degradation and upcycling of plastics and other polymeric materials.
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Leiden University strengthens its focus on Chemical Biology and Medicinal Chemistry with seven new group leaders
Tackling key challenges of Chemical Biology and Medicinal Chemistry to aid drug discovery is one of the focus areas of Leiden University. To this end, the Leiden Early Drug Discovery & Development network (LED3) was established by the Leiden Institute of Chemistry (LIC), the Institute of Biology Leiden…
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Genetic pollution
How does invasive hybridization affect threatened native species?
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Inhibitors and probes targeting mannanases
This thesis describes the synthesis and biochemical evaluation of a variety of cyclophellitol based activity-based probes and inhibitors targeting various endo- and exo-acting retaining glycosidases. In the last two decades a variety of probes and inhibitors for (hemi)cellulose degrading enzymes have…
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Michael RichardsonFaculty of Science
m.k.richardson@biology.leidenuniv.nl | +31 71 527 5215
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Algebraic techniques for low communication secure protocols
Promotor: R. Cramer
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Host-Microbe Interactions in Microbial Sciences
Microbial Sciences' contribution to the Host-Microbe Interactions research theme is to investigate how beneficial or disease-causing microbes associate and interact with their host.
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Inaugural lecture: Data of Value
By comparing individual health data with population data, doctors can provide personalized health advice and patients can learn from each other's experiences. Wessel Kraaij, professor of Applied Data Analytics shows how personal data can have predictive value.
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Clavis Aurea? Structure-enabled approaches of identifying and optimizing GPCR ligands
Promotores: A.P. IJzerman, H.W.T. van Vlijmen
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Hossam AhmedFaculty of Humanities
h.i.a.a.ahmed@hum.leidenuniv.nl | +31 71 527 4417
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Mayra NasFaculty of Humanities
m.o.nas@hum.leidenuniv.nl | 071 5272727
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Computer Science on place 51 in QS World Universities Ranking 2011
Computer Science on place 51 in QS World Universities Ranking 2011
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Erik van Kampen publishes in the Journal of Leukocyte Biology: The effects of poor eating habits persist even after diet
New research published in the Journal of Leukocyte Biology suggests that these changes to the behavior of the immune system are persistent and can continue even after diet is improvedAlmost everyone knows that improving your eating habits will most likely improve your health. What most people may not…
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Tom O'BrienFaculty of Science
obrien@lorentz.leidenuniv.nl | +31 71 527 5568
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Alan Kai HassenFaculty of Science
a.k.hassen@liacs.leidenuniv.nl | +31 71 527 4799
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André Mesquita Fery AntunesFaculty of Science
a.r.mesquita.fery.antunes@liacs.leidenuniv.nl | +31 71 527 2727
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Hongchang ShanFaculty of Science
h.shan@liacs.leidenuniv.nl | +31 71 527 7491
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Jaap van den HerikFaculty of Law
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New Foundations for Separation Logic
The research presented in this thesis concerns one of the most important questions in software engineering of our time: how can we make sure that software is free from memory safety bugs?
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Efficient constraint multi-objective optimization with applications in ship design
Constraint multi-objective optimization with a limited budget for function evaluations is challenging. This thesis tackles this problem by proposing new optimization algorithms. These algorithms are applied on holistic ship design problems. This helps naval architects balance objectives like cost, efficiency,…
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Photoinduced processes in dye-sensitized photoanodes under the spotlight: a multiscale in silico investigation
With increasing carbon dioxide levels in the atmosphere and their detrimental effect on the global climate, modern society needs to push for more renewable energy sources. Storing widely accessible and abundant solar energy in chemical bonds in the form of molecular fuel via artificial photosynthesis…
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Stress-induced protein dynamic and growth arrest in C. elegans during development
During post-embryonic development into adults, animals face an environment that fluctuates constantly. For example, in nutrient availability, temperature, and osmolarity (e.g., salt concentration).
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Mechanistic modelling of drug target binding kinetics as determinant of the time course of drug action in vivo
Drug-target binding kinetics determine the time course of the central event in pharmacotherapy: Drug-target interaction.
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Michael LewFaculty of Science
m.s.lew@liacs.leidenuniv.nl | +31 71 527 7034
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Sandra IrmischFaculty of Science
s.irmisch@biology.leidenuniv.nl | +31 71 527 2727
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Anthe JanssenFaculty of Science
a.p.a.janssen@lic.leidenuniv.nl | 071 5272727
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Meindert LamersFaculty of Science
m.h.lamers@lumc.nl | 071 5271413
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Gamal Adel ElgamalFaculty of Science
i.m.a.f.elgamal@liacs.leidenuniv.nl | 071 5272727
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Hora est through a computer speaker: Leiden’s first fully online PhD defence
Samineh Bagheri is the first PhD candidate to defend her thesis fully remotely.
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Discrete tomography for integer-valued functions
Promotor: S.J. Edixhoven, Co-promotor: K.J. Batenburg
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Teaching
At Molecular Physiology we teach the following courses within the Leiden Institute of Chemistry's Chemistry and Life Science and Technology programmes.
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Nuno De Mesquita César de SáFaculty of Science
n.q.de.mesquita.cesar.de.sa@cml.leidenuniv.nl | +31 71 527 2727
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Large Time Behaviour of Neutral Delay Systems
Promotor: S.M. Verduyn Lunel
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Changing meaning of the rule of law
This article explores how the meaning of the rule of law has evolved over the past century in UK and US parliamentary speeches, focusing on procedural (thin) and substantive (thick) conceptualisations.
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DNA expressions - A formal notation for DNA
Promotores: J.N. Kok, H.J. Hoogeboom
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Metabolic signatures in nutrition and health: short-term diet response, sexual dimorphism and hormone chronobiology
The power of personalized nutrition lies in being able to conduct clinical research on healthy people while capturing metabolic markers sensitive to the impact of environmental and metabolic stressors (e.g. diet, changing sex hormones and the menstrual cycle).
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Systems diagnosis in chronic disease: prediction and evaluation
Promotor: J. van der Greef, T. Hankemeier; Co-promotor: H.A. van Wietmarschen
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Chemical Tools to Illuminate N-acylphosphatidylethanolamine Biosynthesis
This thesis describes the development and optimization of the first molecular tools to study the enzyme PLA2G4E.
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Evolutionary diversification and historical biogeography of Orchidaceae in Central America with emphasis on Costa Rica and Panama
In this thesis, I targeted the orchid genus Lepanthes, one of the six genera of angiosperms that surpasses 1,000 species in the Neotropics, as a study model to investigate the evolutionary processes that promoted species diversifications.
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Chemical tools to study lipid signaling
Synthesis and application of chemical biology tools to study immunomodulatory signaling lipids.
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Key publications
Key publications of the Computational Drug Discovery group
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MOOC ‘Evolution Today’
Evolution is all around you every day. This is the message of a Massive Open Online Course (MOOC) of Leiden University and Naturalis that is offered free of charge to anyone interested.
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Merijn de BakkerFaculty of Science
m.a.g.de.bakker@biology.leidenuniv.nl | +31 71 527 5043
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Paul KesslerFaculty of Science
p.j.a.kessler@hortus.leidenuniv.nl | +31 71 527 5235
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Esther van der EntFaculty of Science
e.van.der.ent@cml.leidenuniv.nl | +31 71 527 2727
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Melissa Hernandez VindasFaculty of Law
m.hernandez.vindas@law.leidenuniv.nl | +31 71 527 2727
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Francesco BudaFaculty of Science
f.buda@lic.leidenuniv.nl | +31 71 527 5723
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Dirk BouwmeesterFaculty of Science
bouwmeester@physics.leidenuniv.nl | +31 71 527 5892
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MARBLES - Marine Biodiversity as Sustainable Resource of Disease-Suppressive Microbes and Bioprotectants for Aquaculture and Crop Diseases
To explore the potential of marine microorganisms as producers of novel antimicrobial agents and as bioprotectants in aqua- and agriculture, using an integrative, ecology-based strategy for bioprospecting.
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Roeland MerksFaculty of Science
merksrmh@math.leidenuniv.nl | +31 71 527 7106