1,122 search results for “computational biologie” in the Public website
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Michael Lew explores how computers can see
Learning how computers can process and describe images just like human beings do. It is one of the key elements of the research of Michael Lew, who sees Deep Learning as a promising way to achieve this goal. On the 1st of January 2021, he was appointed Professor of Deep Learning at the Leiden Institute…
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University provides computer lessons for refugees
Computer skills are essential if you want to become part of Dutch society. Leiden University and Stichting Bestaanskracht, an organisation that helps the vulnerable, are therefore providing computer lessons for refugees who can use some extra digital help.
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Ecosia now available at Leiden University computers
LUGO has some news: If you are using a public computer from Leiden University, you can now set your default search engine to Ecosia.
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The power of one qubit in quantum simulation algorithms
Quantum computing is an emerging technology, which holds the potential to simulate complex quantum systems beyond the reach of classical numerical methods.Despite recent formidable advancements in quantum hardware, constructing a quantum computer capable of performing useful calculations remains challenging.In…
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Pieter BaasFaculty of Science
baas@nhn.leidenuniv.nl | 071 5272727
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Synthetic modification of fusogenic coiled-coil peptides
A structural investigation of coiled coil peptides used as membrane fusogens, mimicing naturally occuring coiled-coil fusion proteins. Synthetic modifications have been made to alter lipid attachment, secondary structure and to insert photoactive azobenzene moieties for active control over coiled coil…
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C5 (Clever Combination of Synthetic Compartmentalization, Carbon Fixation and Compound Biomanufacturing)
Can Cyanobacteria be engineered to convert the greenhouse gas carbon dioxide into the valuable chemical isoprene?
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Zhen XuFaculty of Science
z.xu@liacs.leidenuniv.nl | 071 5272727
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Qianpu ChenFaculty of Science
q.chen.15@liacs.leidenuniv.nl | 071 5272727
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Medical Delta AI for Computational Life Sciences
The fact that scientists are increasingly better able to access molecular cell and tissue data also brings with it a new challenge: how can scientists find the information they need for research among the vast amount of data available?
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Joost BatenburgFaculty of Science
k.j.batenburg@liacs.leidenuniv.nl | 071 5276985
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Insights from modeling metabolism and amoeboid cell motility in the immune system
This thesis focuses on two processes involved in fighting infections: metabolism and immune cell motility and navigation.
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The hunt for the best computer language
Our language is adapted to the context in which we humans communicate. But computers ‘think’ differently. What would a language be like whose structure was optimally adjusted for use by humans and machines? Tessa Verhoef is trying to find the answer.
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Gerhard BurgerFaculty of Science
g.a.burger@lacdr.leidenuniv.nl | 071 5274285
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Han de WindeFaculty of Science
j.h.de.winde@biology.leidenuniv.nl | 071 5271036
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Sam BoerlijstFaculty of Science
s.p.boerlijst@cml.leidenuniv.nl | 071 5272727
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Caitlin BlackFaculty of Science
c.e.black@cml.leidenuniv.nl | 071 5272727
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Vincent MerckxFaculty of Science
merckx@nhn.leidenuniv.nl | 071 5273570
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Archaeology thanks to computer-based research
A mix of data research, artificial intelligence and archaeology led to lively discussions on 31 January. On that day the unique event 'AI & Data Science @ Archaeology' took place in which the Data Science Research Programme (DSRP), SAILS and the Faculty of Archaeology joined forces.
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Towards an effective biodiversity conservation and governance in the Pontocaspian region
Freshwater and brackish water ecosystems are arguably the most vulnerable ecosystems on earth, due to concentrated human developments in and around them. The Pontocaspian (PC) region located at the border of Europe and Asia contains a variety of brackish water ecosystems and unique inhabitants, known…
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Teacher knowledge and lesson design
The studies reported in this thesis were situated in the context of an innovation of Dutch secondary school biology curricula. As in any innovation, the practical knowledge of teachers determine the outcomes through the decisions they make while planning and teaching their lessons. The aim of the studies…
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Aquatic eDNA: Beyond Species Presence
As a non-invasive genetic method, eDNA based approaches have become an important component of ecologists' and environmental managers' toolkits for biomonitoring in conservation and an increasingly important source of ecological knowledge.
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Quantum machine learning: on the design, trainability and noise-robustness of near-term algorithms
This thesis addresses questions on effectively using variational quantum circuits for machine learning tasks.
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LEELIS Conference on future of computer chips
A collaboration of physicists and chemists organized the LEELIS conference on new computer chip technology in Amsterdam on 10-11 November. Leiden physicist Joost Frenken is director of the organizing institute ARCNL.
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Multi-dimensional feature and data mining
In this thesis we explore machine and deep learning approaches that address keychallenges in high dimensional problem areas and also in improving accuracy in wellknown problems. In high dimensional contexts, we have focused on computational fluid dynamics (CFD) simulations.
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Teachers’ practical knowledge and lesson design in the context of innovation
This project is situated within the context of an innovation of the biology curriculum in Dutch secondary schools. The main purposes are (1) to clarify the relation between teachers’ practical knowledge and the decisions they make when planning and implementing their lessons and (2) to develop a professional…
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Systems diagnosis of chronic diseases, explored by metabolomics and ultra-weak photon emission
Promotor: J. van der Greef; Co-promotor: E. van Wijk, M. Wang
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Topology and Geometry in Chiral Liquids
We study the interplay of topology and geometry with chirality for several passive and active systems, employing both analytical and numerical methods.
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Mortality and HyperImage: Visual analytics techniques for biomarker discovery in massive 3D-omics datasets
Over the past decade, several novel types of spatially resolved
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Data structures for quantum circuit verification and how to compare them
Quantum computers are a proposed fundamentally new type of computer. They aim to perform some computations much faster than previously possible by exploiting phenomena at the quantum scale, called superposition and entanglement.
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Rahul BandyopadhyayFaculty of Science
r.bandyopadhyay@liacs.leidenuniv.nl | 071 5272727
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Valentin RosarioFaculty of Science
v.rosario@liacs.leidenuniv.nl | 071 5272727
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Tianyuan WangFaculty of Science
t.wang@liacs.leidenuniv.nl | 071 5272727
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Master Computer Science in Leiden nr.1 according to Elsevier
Master Computer Science in Leiden nr.1 according to Elsevier
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Strategies for braiding and ground state preparation in digital quantum hardware
With the help of quantum mechanics, digital quantum hardware may be able to tackle some of the problems that are too difficult for ordinary computers. But despite these expectations and the ongoing effort of the research community, reliable quantum computers are not yet realized in a lab setting.
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A computer made of floppy rubber
A piece of corrugated rubber can function as a simple computer, displaying memory and displaying the ability to count to two. Leiden physicists describe the computing rubber in the journal PNAS. ‘Simple materials can process information, and we want to find the principles behind that.’
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‘The first quantum computer will fill a sports hall’
The worldwide race to the quantum computer is in full swing. This computer can bring about a breakthrough in discovering medicines and new materials. Leiden researchers, together with the TU Delft, are taking part in the race. There is now a dossier online about their work.
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Quantum computing pioneer Seth Lloyd is the 2019 Lorentz Professor
American physicist and quantum computing pioneer Seth Lloyd is the 65th Lorentz professor. He will deliver the Ehrenfest lecture on 5 June, and several more lectures on quantum computing on 11, 18 and 25 June.
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Geert de SnooFaculty of Science
g.r.de.snoo@cml.leidenuniv.nl | 071 5272727
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Anagnostis TheodoropoulosFaculty of Science
a.theodoropoulos@biology.leidenuniv.nl | 071 5274882
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On the optimization of imaging pipelines
In this thesis, topics relating to the optimization of high-throughput pipelines used for imaging are discussed. In particular, different levels of implementation, i.e., conceptual, software, and hardware, are discussed and the thesis outlines how advances on each level need to be made to make gains…
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Computer Science: half in Beijing and half in Leiden
Leiden University and the Beijing Institute of Technology will be collaborating in the area of computer science teaching and research. One of the first outcomes of this collaboration will be a joint four-year bachelor's programme. Willem te Beest, Vice-President of the Executive Board, and Professor…
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Computer science research in Leiden of major relevance to society
An international committee has assessed computer science research at all Dutch universities in the period 2009-2014. For its computer science research, Leiden was awarded the ‘highest’ mark (1) for relevance to society.
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Hans de IonghFaculty of Science
iongh@cml.leidenuniv.nl | 071 5277461
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Hanneke LeegwaterFaculty of Science
h.leegwater@lacdr.leidenuniv.nl | 071 5272727
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Xaver FunkFaculty of Social and Behavioural Sciences
x.f.funk@fsw.leidenuniv.nl | 071 5272727
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Algorithm selection and configuration for Noisy Intermediate Scale Quantum methods for industrial applications
Quantum hardware comes with a different computing paradigm and new ways to tackle applications. Much effort has to be put into understanding how to leverage this technology to give real-world advantages in areas of interest for industries such as combinatorial optimization or machine learning.
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Functions of P38 and ERK kinases in zebrafish early development
Promotor: Prof.dr. H.P. Spaink Co-promotor: Dr. B.E. Snaar
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Marcello BonsangueFaculty of Science
m.m.bonsangue@liacs.leidenuniv.nl | 071 5277095
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Model-assisted robust optimization for continuous black-box problems
Uncertainty and noise are frequently-encountered obstacles in real-world applications of numerical optimization. The practice of optimization that deals with uncertainties and noise is commonly referred to as robust optimization.